Lots of good info in this thread.
I own a 2015 BE100 - Hybrid PCB & DC heaters, Mallory caps and the greasy filtering scheme. I've made a few changes to the amp, and since I'm about 5000 miles and 1 country away from Dave's shop, I did the work myself. The hybrid PCB is super high quality, so these amps are a tech's dream and very easy to work on if you know what you're doing. Here's my take:
Moving the NFB from the impedance selector to the 4 ohm tap is single best thing you can do for any version that isn't already set up like this. Makes the amp a bit brighter, but opens it up and lifts the blanket off. You don't need a Response control. Just connect the purple wire to the 4 ohm and your good to go, without the option anxiety that one more knob to adjust will add to the equation. I tested this with a pot plumbed in here and couldn't stop futzing with it. Just said fuk it and went with the stock 47k resistor off the 4ohm tap, and I've been happy ever since. I think Dave has now gone to a switch on the 100 DLX for 2 or 3 set values vs infinite possibilities.
The DI output jack and level control are perfectly situated on the back panel to be converted into a resonance control and "thump" switch. If you want the resonance control on the front, then sure, go ahead and get out the drill, but drilling holes in the faceplate of a 3k amp is not usually something people want to do. In this case, you have options. The 1 meg Resonance pot can go where the DI level control is, and do like CrazyNutz and put a .0047uf across the pot and add a switch in the DI jack hole to parallel a .0022uf for the .0068uf Slax / JJ value.
Convert the clean channel to Fender Deluxe values. You have to move a wire and swap out 1 resistor, 1 mica cap and 2 film caps. Like I said earlier, the amp is very well made and very easy to work on, so this mod will take you, or your tech, about 10 minutes to do. Boom! Killer clean tone for days....
If you don't have a structure switch, add one now. It lets you lower the overall gain structure without the tone thinning out like it used to on the older amps when you turned the gain knob way down.
The chassis on my 2015 already had the hole in the sheet metal, so I only had to drill the plexi panel. Notwithstanding what I said earlier about drilling holes in amps, this switch is now standard on these amps, so I don't view doing this mod as a problem.
That's it!
Best amp ever